How can i solve the installation probelm of gromacs?Failed to install a ruby gem, eventmachineHelp with AMD Catalyst installationYamcha 0.33 Make InstallError running make to build Sage on Ubuntu 16.04Configure meshlab to convert .x3d to .u3dSUPREM3 RELEASE B.8628 installationError While Installing IBM Watson TTS“git --version” still showing the older version of gitUnrecognized command line option with gfortran in BRAMS installationturbodbc installation error in ubuntu 18.04
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How can i solve the installation probelm of gromacs?
Failed to install a ruby gem, eventmachineHelp with AMD Catalyst installationYamcha 0.33 Make InstallError running make to build Sage on Ubuntu 16.04Configure meshlab to convert .x3d to .u3dSUPREM3 RELEASE B.8628 installationError While Installing IBM Watson TTS“git --version” still showing the older version of gitUnrecognized command line option with gfortran in BRAMS installationturbodbc installation error in ubuntu 18.04
.everyoneloves__top-leaderboard:empty,.everyoneloves__mid-leaderboard:empty,.everyoneloves__bot-mid-leaderboard:empty margin-bottom:0;
I try to install gromacs-5.1.5. I followed the recommendation installation guide, but I got an error..
/usr/bin/ld: ../contrib/fftw/fftwBuild-prefix/lib/libfftw3f.a(assert.o): relocation R_X86_64_PC32 against symbol `stdout@@GLIBC_2.2.5' can not be used when making a shared object; recompile with -fPIC
/usr/bin/ld: final link failed: Bad value
collect2: error: ld returned 1 exit status
src/gromacs/CMakeFiles/libgromacs.dir/build.make:17627: recipe for target 'lib/libgromacs.so.1.5.0' failed
make[2]: *** [lib/libgromacs.so.1.5.0] Error 1
CMakeFiles/Makefile2:2031: recipe for target 'src/gromacs/CMakeFiles/libgromacs.dir/all' failed
make[1]: *** [src/gromacs/CMakeFiles/libgromacs.dir/all] Error 2
Makefile:162: recipe for target 'all' failed
make: *** [all] Error 2
This error occurred after cmake and make command:
cmake .. -DGMX_BUILD_OWN_FFTW=ON -DREGRESSIONTEST_DOWNLOAD=ON
make ---> error
Is there anyone can help me?
I installed gromacs-2018.1 before,
But i need 5.1.5 version, so i remove 2018.1 ver and tried to install 5.1.5 ver.
But i don'k know why it make some error..
Thank you
software-installation
edited Apr 15 at 9:45
Mr Shunz
2,6694 gold badges22 silver badges24 bronze badges
asked Apr 15 at 6:57
Soi YunSoi Yun
11 bronze badge
add a comment |
I try to install gromacs-5.1.5. I followed the recommendation installation guide, but I got an error..
/usr/bin/ld: ../contrib/fftw/fftwBuild-prefix/lib/libfftw3f.a(assert.o): relocation R_X86_64_PC32 against symbol `stdout@@GLIBC_2.2.5' can not be used when making a shared object; recompile with -fPIC
/usr/bin/ld: final link failed: Bad value
collect2: error: ld returned 1 exit status
src/gromacs/CMakeFiles/libgromacs.dir/build.make:17627: recipe for target 'lib/libgromacs.so.1.5.0' failed
make[2]: *** [lib/libgromacs.so.1.5.0] Error 1
CMakeFiles/Makefile2:2031: recipe for target 'src/gromacs/CMakeFiles/libgromacs.dir/all' failed
make[1]: *** [src/gromacs/CMakeFiles/libgromacs.dir/all] Error 2
Makefile:162: recipe for target 'all' failed
make: *** [all] Error 2
This error occurred after cmake and make command:
cmake .. -DGMX_BUILD_OWN_FFTW=ON -DREGRESSIONTEST_DOWNLOAD=ON
make ---> error
Is there anyone can help me?
I installed gromacs-2018.1 before,
But i need 5.1.5 version, so i remove 2018.1 ver and tried to install 5.1.5 ver.
But i don'k know why it make some error..
Thank you
software-installation
edited Apr 15 at 9:45
Mr Shunz
2,6694 gold badges22 silver badges24 bronze badges
asked Apr 15 at 6:57
Soi YunSoi Yun
11 bronze badge
add a comment |
I try to install gromacs-5.1.5. I followed the recommendation installation guide, but I got an error..
/usr/bin/ld: ../contrib/fftw/fftwBuild-prefix/lib/libfftw3f.a(assert.o): relocation R_X86_64_PC32 against symbol `stdout@@GLIBC_2.2.5' can not be used when making a shared object; recompile with -fPIC
/usr/bin/ld: final link failed: Bad value
collect2: error: ld returned 1 exit status
src/gromacs/CMakeFiles/libgromacs.dir/build.make:17627: recipe for target 'lib/libgromacs.so.1.5.0' failed
make[2]: *** [lib/libgromacs.so.1.5.0] Error 1
CMakeFiles/Makefile2:2031: recipe for target 'src/gromacs/CMakeFiles/libgromacs.dir/all' failed
make[1]: *** [src/gromacs/CMakeFiles/libgromacs.dir/all] Error 2
Makefile:162: recipe for target 'all' failed
make: *** [all] Error 2
This error occurred after cmake and make command:
cmake .. -DGMX_BUILD_OWN_FFTW=ON -DREGRESSIONTEST_DOWNLOAD=ON
make ---> error
Is there anyone can help me?
I installed gromacs-2018.1 before,
But i need 5.1.5 version, so i remove 2018.1 ver and tried to install 5.1.5 ver.
But i don'k know why it make some error..
Thank you
software-installation
edited Apr 15 at 9:45
Mr Shunz
2,6694 gold badges22 silver badges24 bronze badges
asked Apr 15 at 6:57
Soi YunSoi Yun
11 bronze badge
I try to install gromacs-5.1.5. I followed the recommendation installation guide, but I got an error..
/usr/bin/ld: ../contrib/fftw/fftwBuild-prefix/lib/libfftw3f.a(assert.o): relocation R_X86_64_PC32 against symbol `stdout@@GLIBC_2.2.5' can not be used when making a shared object; recompile with -fPIC
/usr/bin/ld: final link failed: Bad value
collect2: error: ld returned 1 exit status
src/gromacs/CMakeFiles/libgromacs.dir/build.make:17627: recipe for target 'lib/libgromacs.so.1.5.0' failed
make[2]: *** [lib/libgromacs.so.1.5.0] Error 1
CMakeFiles/Makefile2:2031: recipe for target 'src/gromacs/CMakeFiles/libgromacs.dir/all' failed
make[1]: *** [src/gromacs/CMakeFiles/libgromacs.dir/all] Error 2
Makefile:162: recipe for target 'all' failed
make: *** [all] Error 2
This error occurred after cmake and make command:
cmake .. -DGMX_BUILD_OWN_FFTW=ON -DREGRESSIONTEST_DOWNLOAD=ON
make ---> error
Is there anyone can help me?
I installed gromacs-2018.1 before,
But i need 5.1.5 version, so i remove 2018.1 ver and tried to install 5.1.5 ver.
But i don'k know why it make some error..
Thank you
software-installation
software-installation
edited Apr 15 at 9:45
Mr Shunz
2,6694 gold badges22 silver badges24 bronze badges
asked Apr 15 at 6:57
Soi YunSoi Yun
11 bronze badge
edited Apr 15 at 9:45
Mr Shunz
2,6694 gold badges22 silver badges24 bronze badges
asked Apr 15 at 6:57
Soi YunSoi Yun
11 bronze badge
edited Apr 15 at 9:45
Mr Shunz
2,6694 gold badges22 silver badges24 bronze badges
edited Apr 15 at 9:45
Mr Shunz
2,6694 gold badges22 silver badges24 bronze badges
edited Apr 15 at 9:45
Mr Shunz
2,6694 gold badges22 silver badges24 bronze badges
2,6694 gold badges22 silver badges24 bronze badges
asked Apr 15 at 6:57
Soi YunSoi Yun
11 bronze badge
asked Apr 15 at 6:57
Soi YunSoi Yun
11 bronze badge
asked Apr 15 at 6:57
Soi YunSoi Yun
11 bronze badge
11 bronze badge
add a comment |
add a comment |
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